EnhancerDB
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  3. rs146942760[chr16:88834184]
Enhancers that have rs146942760[chr16:88834184]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146942760[chr16:88834184]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88833625 88836287 TCF7L2 GTRD no Colon (HCT116) 21736939
chr16 88833625 88836287 TCF7L2 GTRD no Colon (HCT116) 108223393
chr16 88834173 88834188 TFAP2A JASPAR yes 12302029
chr16 88834173 88834188 TFAP2C JASPAR yes 12302030
chr16 88834176 88834187 TFAP2A JASPAR yes 12302031
chr16 88834176 88834187 TFAP2B JASPAR yes 12302032
chr16 88834176 88834187 TFAP2C JASPAR yes 12302033
chr16 88834176 88834188 TFAP2A JASPAR yes 12302034
chr16 88834176 88834188 TFAP2B JASPAR yes 12302035
chr16 88834176 88834188 TFAP2C JASPAR yes 12302036
chr16 88834181 88834199 ESR1 JASPAR yes 12302037
Genes associated with rs146942760[chr16:88834184], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More