EnhancerDB
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  3. rs146975339[chr17:2115622]
Enhancers that have rs146975339[chr17:2115622]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146975339[chr17:2115622]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2115609 2115622 SMAD2 JASPAR yes 52738213
chr17 2115622 2115643 IRF1 JASPAR yes 52738214
Genes associated with rs146975339[chr17:2115622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More