EnhancerDB
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  3. rs1472565[chr1:19755030]
Enhancers that have rs1472565[chr1:19755030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1472565[chr1:19755030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19755012 19755033 IRF1 JASPAR yes 27188922
chr1 19755014 19755035 IRF1 JASPAR yes 27188925
chr1 19755021 19755036 FOXP1 JASPAR yes 27188926
Genes associated with rs1472565[chr1:19755030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More