EnhancerDB
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  3. rs147299904[chr1:39663232]
Enhancers that have rs147299904[chr1:39663232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs147299904[chr1:39663232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39663214 39663232 IRF2 JASPAR yes 28266199
chr1 39663215 39663236 IRF1 JASPAR yes 28266200
chr1 39663217 39663232 PRDM1 JASPAR yes 28266201
chr1 39663219 39663233 IRF7 JASPAR yes 28266203
chr1 39663219 39663233 IRF8 JASPAR yes 28266204
chr1 39663219 39663234 IRF9 JASPAR yes 28266205
chr1 39663230 39663244 STAT1 JASPAR yes 28266206
chr1 39663230 39663245 STAT2 JASPAR yes 28266207
chr1 39663231 39663243 IRF1 JASPAR yes 28266208
Genes associated with rs147299904[chr1:39663232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More