EnhancerDB
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  3. rs147989417[chr6:11220553]
Enhancers that have rs147989417[chr6:11220553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs147989417[chr6:11220553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11220545 11220555 SP1 JASPAR yes 99865930
chr6 11220545 11220555 ZNF740 JASPAR yes 99865931
chr6 11220546 11220556 SP1 JASPAR yes 99865932
chr6 11220549 11220555 SP1 TRANSFAC yes 99865933
Genes associated with rs147989417[chr6:11220553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More