EnhancerDB
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  3. rs148052227[chr17:57831602]
Enhancers that have rs148052227[chr17:57831602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs148052227[chr17:57831602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57831590 57831603 POU2F2 JASPAR yes 55077488
chr17 57831600 57831604 YY1 TRANSFAC yes 55077489
chr17 57831600 57831610 HOXC10 JASPAR yes 55077490
chr17 57831600 57831610 HOXD11 JASPAR yes 55077491
chr17 57831600 57831611 HOXA10 JASPAR yes 55077492
chr17 57831600 57831611 HOXC11 JASPAR yes 55077493
chr17 57831600 57831611 HOXC12 JASPAR yes 55077494
chr17 57831600 57831611 HOXD12 JASPAR yes 55077495
chr17 57831601 57831610 CDX1 JASPAR yes 55077496
chr17 57831601 57831612 CDX2 JASPAR yes 55077497
Genes associated with rs148052227[chr17:57831602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More