EnhancerDB
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  3. rs148099909[chr17:80481999]
Enhancers that have rs148099909[chr17:80481999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148099909[chr17:80481999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80481995 80482005 SREBF2 JASPAR yes 56369883
chr17 80481995 80482006 USF1 JASPAR yes 56369884
chr17 80481995 80482006 USF2 JASPAR yes 56369885
Genes associated with rs148099909[chr17:80481999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More