EnhancerDB
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  3. rs148129435[chr10:21649520]
Enhancers that have rs148129435[chr10:21649520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21636765 21666075 enh13040
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs148129435[chr10:21649520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21649132 21649755 SOX2 GTRD no Neural Stem Cells (H9) 21420997
chr10 21649136 21649794 SOX2 GTRD no Neural Stem Cells (H9) 21420998
chr10 21649160 21649779 SOX2 GTRD no Neural Stem Cells (H9) 21420999
chr10 21649235 21649788 SOX2 GTRD no Neural Stem Cells (H9) 21421000
chr10 21649283 21649554 SOX2 GTRD no Neural Stem Cells (H9) 21421001
chr10 21649484 21649759 SOX2 GTRD no Neural Stem Cells (H9) 21421002
chr10 21649517 21649528 FOSL2 JASPAR yes 125901481
chr10 21649519 21649532 SMAD2 JASPAR yes 125901482
Genes associated with rs148129435[chr10:21649520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More