EnhancerDB
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  3. rs148141172[chr1:19780743]
Enhancers that have rs148141172[chr1:19780743]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148141172[chr1:19780743]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19780326 19780782 ZNF143 GTRD no Epithelial (MCF-7) 107802304
chr1 19780735 19780748 EOMES JASPAR yes 27192563
chr1 19780737 19780747 TBR1 JASPAR yes 27192564
chr1 19780737 19780748 TBX20 JASPAR yes 27192565
chr1 19780737 19780748 TBX2 JASPAR yes 27192566
chr1 19780738 19780748 TBX21 JASPAR yes 27192567
chr1 19780739 19780747 MGA JASPAR yes 27192568
chr1 19780739 19780747 TBX15 JASPAR yes 27192569
chr1 19780739 19780747 TBX1 JASPAR yes 27192570
chr1 19780739 19780747 TBX4 JASPAR yes 27192571
chr1 19780739 19780747 TBX5 JASPAR yes 27192572
chr1 19780739 19780748 ZEB1 JASPAR yes 27192573
chr1 19780740 19780750 ID4 JASPAR yes 27192574
chr1 19780740 19780750 TCF3 JASPAR yes 27192575
chr1 19780740 19780750 TCF4 JASPAR yes 27192576
chr1 19780741 19780750 SNAI2 JASPAR yes 27192577
chr1 19780741 19780761 TP63 JASPAR yes 27192578
chr1 19780742 19780747 USF2 TRANSFAC yes 27192579
Genes associated with rs148141172[chr1:19780743], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More