EnhancerDB
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  3. rs148142482[chr1:19749649]
Enhancers that have rs148142482[chr1:19749649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148142482[chr1:19749649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19749643 19749653 ALX3 JASPAR yes 27188170
chr1 19749643 19749653 LBX2 JASPAR yes 27188171
chr1 19749643 19749653 MIXL1 JASPAR yes 27188172
chr1 19749644 19749652 BARX1 JASPAR yes 27188173
chr1 19749644 19749652 BSX JASPAR yes 27188174
chr1 19749644 19749652 DLX6 JASPAR yes 27188175
chr1 19749644 19749652 ISX JASPAR yes 27188176
chr1 19749644 19749652 LBX1 JASPAR yes 27188177
chr1 19749644 19749652 LHX9 JASPAR yes 27188178
chr1 19749644 19749652 MSX1 JASPAR yes 27188179
chr1 19749644 19749652 MSX2 JASPAR yes 27188180
chr1 19749644 19749652 NKX6-2 JASPAR yes 27188181
chr1 19749644 19749652 PRRX1 JASPAR yes 27188182
chr1 19749644 19749652 RAX2 JASPAR yes 27188183
chr1 19749644 19749652 SHOX JASPAR yes 27188184
chr1 19749644 19749652 UNCX JASPAR yes 27188185
Genes associated with rs148142482[chr1:19749649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More