EnhancerDB
  1. Home
  2. SNP
  3. rs148145172[chr19:10988885]
Enhancers that have rs148145172[chr19:10988885]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10983285 11012541 enh5003
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs148145172[chr19:10988885]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10988783 10989357 ZNF143 GTRD no Epithelial (MCF-7) 21849139
chr19 10988783 10989357 ZNF143 GTRD no Epithelial (MCF-7) 108384222
chr19 10988814 10989429 ZNF274 GTRD no Bone Marrow (K562) 21849140
chr19 10988814 10989429 ZNF274 GTRD no Bone Marrow (K562) 108384223
chr19 10988882 10988903 IRF1 JASPAR yes 112441999
chr19 10988884 10988899 IRF9 JASPAR yes 112442000
Genes associated with rs148145172[chr19:10988885], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More