EnhancerDB
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  3. rs148236348[chr6:112300224]
Enhancers that have rs148236348[chr6:112300224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
Transcript factors that have rs148236348[chr6:112300224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112300205 112300225 RREB1 JASPAR yes 104393400
chr6 112300212 112300227 FOXP1 JASPAR yes 104393401
chr6 112300212 112300233 IRF1 JASPAR yes 104393402
chr6 112300216 112300230 IRF7 JASPAR yes 104393404
chr6 112300216 112300230 IRF8 JASPAR yes 104393405
chr6 112300216 112300231 IRF9 JASPAR yes 104393406
Genes associated with rs148236348[chr6:112300224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More