EnhancerDB
  1. Home
  2. SNP
  3. rs148246484[chr5:173188008]
Enhancers that have rs148246484[chr5:173188008]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148246484[chr5:173188008]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173188002 173188014 PKNOX1 JASPAR yes 67901521
chr5 173188002 173188014 PKNOX2 JASPAR yes 67901522
chr5 173188002 173188014 TGIF2 JASPAR yes 67901523
chr5 173188003 173188013 ID4 JASPAR yes 67901524
chr5 173188004 173188013 SNAI2 JASPAR yes 67901525
chr5 173188005 173188010 USF2 TRANSFAC yes 67901526
chr5 173188008 173188012 NFE TRANSFAC yes 67901527
Genes associated with rs148246484[chr5:173188008], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More