EnhancerDB
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  3. rs148296453[chr6:30813972]
Enhancers that have rs148296453[chr6:30813972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148296453[chr6:30813972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30813951 30813972 IRF1 JASPAR yes 101058731
chr6 30813956 30813977 IRF1 JASPAR yes 101058734
chr6 30813957 30813972 FOXP1 JASPAR yes 101058735
chr6 30813957 30813978 IRF1 JASPAR yes 101058736
chr6 30813958 30813973 STAT2 JASPAR yes 101058737
chr6 30813961 30813982 IRF1 JASPAR yes 101058738
chr6 30813962 30813977 FOXP1 JASPAR yes 101058739
chr6 30813962 30813983 IRF1 JASPAR yes 101058740
chr6 30813966 30813987 IRF1 JASPAR yes 101058741
chr6 30813967 30813982 FOXP1 JASPAR yes 101058742
Genes associated with rs148296453[chr6:30813972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More