EnhancerDB
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  3. rs148357692[chr1:52029982]
Enhancers that have rs148357692[chr1:52029982]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
chr1 52029722 52030067 vista1577
VISTA
Transcript factors that have rs148357692[chr1:52029982]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52029698 52030079 ZNF274 GTRD no Liver (HepG2) 107803241
chr1 52029703 52030164 ZNF274 GTRD no Liver (HepG2) 107803242
chr1 52029726 52030132 ZNF274 GTRD no Liver (HepG2) 107803243
chr1 52029786 52030156 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803244
chr1 52029789 52030222 RELA UCSC Txn Factor no Conserved 107803245
chr1 52029799 52030183 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803246
chr1 52029981 52029992 NFKB1 JASPAR yes 28851325
chr1 52029981 52029992 NFKB1 JASPAR yes 118289540
chr1 52029981 52029994 NFKB1 JASPAR yes 28851326
chr1 52029981 52029994 NFKB2 JASPAR yes 28851327
chr1 52029981 52029994 NFKB1 JASPAR yes 118289541
chr1 52029981 52029994 NFKB2 JASPAR yes 118289542
chr1 52029982 52029992 NFKB1 JASPAR yes 28851328
chr1 52029982 52029992 RELA JASPAR yes 28851329
chr1 52029982 52029992 REL JASPAR yes 28851330
chr1 52029982 52029992 NFKB1 JASPAR yes 118289543
chr1 52029982 52029992 RELA JASPAR yes 118289544
chr1 52029982 52029992 REL JASPAR yes 118289545
chr1 52029982 52029993 NFKB1 JASPAR yes 28851331
chr1 52029982 52029993 NFKB1 JASPAR yes 118289546
Genes associated with rs148357692[chr1:52029982], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More