EnhancerDB
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  3. rs148397173[chr11:65205958]
Enhancers that have rs148397173[chr11:65205958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65180298 65217415 enh1825
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs148397173[chr11:65205958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65203953 65206089 TCF7L2 GTRD no Colon (HCT116) 21492752
chr11 65204191 65206168 ZNF274 GTRD no Cervix (HeLa-S3) 21492758
chr11 65205886 65206764 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21492829
Genes associated with rs148397173[chr11:65205958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr11 66188475 66194178 + NPAS4 ENSG00000174576.4 66188475 982517 Esophagus 0.0965482 11116