EnhancerDB
  1. Home
  2. SNP
  3. rs148452440[chr5:79546902]
Enhancers that have rs148452440[chr5:79546902]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79539202 79550375 enh8515
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs148452440[chr5:79546902]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79546892 79546903 HOXC12 JASPAR yes 63713085
chr5 79546892 79546903 HOXC13 JASPAR yes 63713086
Genes associated with rs148452440[chr5:79546902], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More