EnhancerDB
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  3. rs148474627[chr1:25101339]
Enhancers that have rs148474627[chr1:25101339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs148474627[chr1:25101339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25101332 25101345 NFKB1 JASPAR yes 27530392
chr1 25101334 25101340 ZNF354C JASPAR yes 27530393
chr1 25101337 25101348 USF1 JASPAR yes 27530394
chr1 25101337 25101348 USF2 JASPAR yes 27530395
chr1 25101338 25101348 SREBF2 JASPAR yes 27530396
Genes associated with rs148474627[chr1:25101339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More