EnhancerDB
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  3. rs148545639[chr16:88830974]
Enhancers that have rs148545639[chr16:88830974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs148545639[chr16:88830974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88830206 88831226 ZBTB33 GTRD no Lung (A549) 108223380
chr16 88830246 88831280 ZNF143 GTRD no Epithelial (MCF-7) 21736930
chr16 88830246 88831280 ZNF143 GTRD no Epithelial (MCF-7) 108223382
chr16 88830972 88830985 ATF4 JASPAR yes 12301532
chr16 88830973 88830985 HLF JASPAR yes 12301533
Genes associated with rs148545639[chr16:88830974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 88636789 88698374 + ZC3H18 ENSG00000158545.11 88636789 132600 Ovary 0.0583797 15155