EnhancerDB
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  3. rs148549587[chr1:52086539]
Enhancers that have rs148549587[chr1:52086539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52082245 52099655 enh11847
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs148549587[chr1:52086539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52086530 52086546 POU4F3 JASPAR yes 28855012
chr1 52086532 52086546 POU4F1 JASPAR yes 28855013
chr1 52086532 52086547 FOXP1 JASPAR yes 28855014
chr1 52086532 52086547 HNF1A JASPAR yes 28855015
chr1 52086533 52086545 FOXC2 JASPAR yes 28855016
chr1 52086534 52086545 FOXB1 JASPAR yes 28855017
chr1 52086534 52086545 FOXC1 JASPAR yes 28855018
chr1 52086535 52086539 YY1 TRANSFAC yes 28855019
chr1 52086536 52086551 HNF1A JASPAR yes 28855020
chr1 52086537 52086551 ONECUT3 JASPAR yes 28855021
Genes associated with rs148549587[chr1:52086539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More