EnhancerDB
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  3. rs148680376[chr12:46831838]
Enhancers that have rs148680376[chr12:46831838]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs148680376[chr12:46831838]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46830845 46832062 TCF7L2 GTRD no Colon (HCT116) 21541620
chr12 46831162 46831896 TCF7L2 GTRD no Colon (HCT116) 21541622
chr12 46831304 46832763 ZBTB33 GTRD no Brain (SK-N-SH) 108027317
chr12 46831368 46831990 TCF7L2 GTRD no Colon (HCT116) 21541628
chr12 46831385 46832043 ZNF143 GTRD no Epithelial (MCF-7) 21541629
chr12 46831834 46831839 TFAP2A TRANSFAC yes 120620393
chr12 46831834 46831840 MZF1 JASPAR yes 120620394
chr12 46831834 46831847 NFKB1 JASPAR yes 120620395
chr12 46831834 46831847 NFKB2 JASPAR yes 120620396
chr12 46831835 46831845 GSC2 JASPAR yes 120620397
chr12 46831835 46831845 GSC JASPAR yes 120620398
chr12 46831836 46831844 OTX1 JASPAR yes 120620399
chr12 46831836 46831844 OTX2 JASPAR yes 120620400
chr12 46831836 46831844 RHOXF1 JASPAR yes 120620401
chr12 46831836 46831845 PITX3 JASPAR yes 120620402
Genes associated with rs148680376[chr12:46831838], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More