EnhancerDB
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  3. rs148812029[chr1:24605965]
Enhancers that have rs148812029[chr1:24605965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs148812029[chr1:24605965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24605946 24605967 IRF1 JASPAR yes 27494917
chr1 24605947 24605967 RREB1 JASPAR yes 27494919
chr1 24605947 24605968 IRF1 JASPAR yes 27494920
chr1 24605950 24605965 FOXP1 JASPAR yes 27494921
chr1 24605951 24605966 STAT2 JASPAR yes 27494922
chr1 24605952 24605967 FOXP1 JASPAR yes 27494923
chr1 24605952 24605973 IRF1 JASPAR yes 27494924
chr1 24605953 24605974 IRF1 JASPAR yes 27494925
chr1 24605954 24605966 FOXC2 JASPAR yes 27494926
chr1 24605954 24605974 RREB1 JASPAR yes 27494927
chr1 24605955 24605966 FOXP2 JASPAR yes 27494928
chr1 24605959 24605979 RREB1 JASPAR yes 27494929
chr1 24605961 24605976 FOXP1 JASPAR yes 27494930
chr1 24605963 24605983 RREB1 JASPAR yes 27494931
chr1 24605964 24605975 FOXP2 JASPAR yes 27494932
chr1 24605965 24605985 RREB1 JASPAR yes 27494933
Genes associated with rs148812029[chr1:24605965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More