EnhancerDB
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  3. rs148869487[chr1:1788685]
Enhancers that have rs148869487[chr1:1788685]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148869487[chr1:1788685]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1788670 1788689 RFX2 JASPAR yes 26207676
chr1 1788677 1788691 STAT1 JASPAR yes 26207678
Genes associated with rs148869487[chr1:1788685], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 1716729 1822495 - GNB1 ENSG00000078369.13 1822495 0 Stomach 0.0325615 52