EnhancerDB
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  3. rs148936001[chr17:43390245]
Enhancers that have rs148936001[chr17:43390245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs148936001[chr17:43390245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43387182 43390265 ZBTB33 GTRD no Lung (A549) 108264464
chr17 43388596 43390291 ZBTB33 GTRD no Lung (A549) 108264555
chr17 43389140 43391154 POLR2A UCSC Txn Factor no Conserved 108264597
chr17 43389938 43391100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764703
chr17 43390095 43390495 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764704
chr17 43390201 43390477 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764705
chr17 43390206 43390470 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21764706
chr17 43390211 43390481 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764707
chr17 43390236 43390247 E2F6 JASPAR yes 54443255
chr17 43390242 43390506 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21764708
Genes associated with rs148936001[chr17:43390245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More