EnhancerDB
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  3. rs148988026[chr17:65395620]
Enhancers that have rs148988026[chr17:65395620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs148988026[chr17:65395620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65394457 65396122 ZNF143 GTRD no Epithelial (MCF-7) 21782151
chr17 65394457 65396122 ZNF143 GTRD no Epithelial (MCF-7) 108285761
chr17 65394521 65395926 ZNF143 GTRD no Epithelial (MCF-7) 21782152
chr17 65394521 65395926 ZNF143 GTRD no Epithelial (MCF-7) 108285762
chr17 65394591 65395994 ZNF143 GTRD no Epithelial (MCF-7) 21782154
chr17 65394591 65395994 ZNF143 GTRD no Epithelial (MCF-7) 108285764
chr17 65395611 65395622 RUNX1 JASPAR yes 55498070
chr17 65395619 65395623 YY1 TRANSFAC yes 55498071
Genes associated with rs148988026[chr17:65395620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More