EnhancerDB
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  3. rs149030622[chr6:43979670]
Enhancers that have rs149030622[chr6:43979670]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149030622[chr6:43979670]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43979669 43979680 TFAP2A JASPAR yes 101812087
chr6 43979669 43979680 TFAP2B JASPAR yes 101812088
chr6 43979669 43979680 TFAP2C JASPAR yes 101812089
Genes associated with rs149030622[chr6:43979670], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More