EnhancerDB
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  3. rs149055289[chr1:205261606]
Enhancers that have rs149055289[chr1:205261606]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149055289[chr1:205261606]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205260611 205264392 ZNF274 GTRD no Bone Marrow (K562) 107861587
chr1 205260611 205264392 ZNF274 GTRD no Bone Marrow (K562) 107861588
chr1 205261100 205261965 TEF1 GTRD no Bone (Osteoblast) 21371651
chr1 205261436 205261757 ZNF274 GTRD no Liver (HepG2) 21371652
chr1 205261464 205261708 TEF1 GTRD no Bone (Osteoblast) 21371653
chr1 205261464 205261856 ZNF274 GTRD no Cervix (HeLa-S3) 21371654
chr1 205261539 205264526 ZNF274 GTRD no Bone Marrow (K562) 107861589
chr1 205261539 205264526 ZNF274 GTRD no Bone Marrow (K562) 107861590
chr1 205261596 205261617 ZNF263 JASPAR yes 34752252
chr1 205261599 205261620 ZNF263 JASPAR yes 34752253
chr1 205261600 205261606 ETS1 JASPAR yes 34752254
chr1 205261600 205261606 SPI1 JASPAR yes 34752255
Genes associated with rs149055289[chr1:205261606], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More