EnhancerDB
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  3. rs149090277[chr1:117419807]
Enhancers that have rs149090277[chr1:117419807]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs149090277[chr1:117419807]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117419407 117419981 ZNF274 GTRD no Bone Marrow (K562) 21334026
chr1 117419493 117419875 ZNF274 GTRD no Bone Marrow (K562) 21334027
chr1 117419802 117420396 ZNF143 GTRD no Epithelial (MCF-7) 21334028
chr1 117419806 117419812 ZNF354C JASPAR yes 31847710
Genes associated with rs149090277[chr1:117419807], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More