EnhancerDB
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  3. rs149102849[chr5:173203230]
Enhancers that have rs149102849[chr5:173203230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149102849[chr5:173203230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173203221 173203236 TFAP2C JASPAR yes 67903559
chr5 173203223 173203235 INSM1 JASPAR yes 67903560
chr5 173203223 173203235 TFAP2A JASPAR yes 67903561
chr5 173203223 173203235 TFAP2B JASPAR yes 67903562
chr5 173203223 173203235 TFAP2C JASPAR yes 67903563
chr5 173203223 173203238 TFAP2A JASPAR yes 67903564
chr5 173203224 173203235 TFAP2A JASPAR yes 67903565
chr5 173203224 173203235 TFAP2B JASPAR yes 67903566
chr5 173203224 173203235 TFAP2C JASPAR yes 67903567
chr5 173203225 173203234 TFAP2A JASPAR yes 67903568
Genes associated with rs149102849[chr5:173203230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More