EnhancerDB
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  3. rs149125871[chr12:125197575]
Enhancers that have rs149125871[chr12:125197575]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 125197556 125198099 vista15323
VISTA
Transcript factors that have rs149125871[chr12:125197575]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125197563 125197867 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582172
chr12 125197563 125197867 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069550
chr12 125197568 125197578 GABPA JASPAR yes 82497419
chr12 125197568 125197578 GABPA JASPAR yes 124412271
chr12 125197570 125197576 ETS1 JASPAR yes 82497420
chr12 125197570 125197576 SPI1 JASPAR yes 82497421
chr12 125197570 125197576 ETS1 JASPAR yes 124412272
chr12 125197570 125197576 SPI1 JASPAR yes 124412273
chr12 125197570 125197580 ELK1 JASPAR yes 82497422
chr12 125197570 125197580 ELK1 JASPAR yes 124412274
chr12 125197570 125198100 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582173
chr12 125197570 125198100 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069551
chr12 125197571 125197967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582174
chr12 125197571 125197967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069552
Genes associated with rs149125871[chr12:125197575], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More