EnhancerDB
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  3. rs149176550[chr16:85248446]
Enhancers that have rs149176550[chr16:85248446]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149176550[chr16:85248446]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85248101 85248656 ZNF143 GTRD no Epithelial (MCF-7) 21721350
chr16 85248253 85248677 ZNF143 GTRD no Epithelial (MCF-7) 21721351
chr16 85248440 85248449 SNAI2 JASPAR yes 12033622
chr16 85248440 85248450 FIGLA JASPAR yes 12033623
chr16 85248440 85248450 TCF4 JASPAR yes 12033624
chr16 85248441 85248461 RREB1 JASPAR yes 12033625
chr16 85248442 85248451 ZEB1 JASPAR yes 12033626
chr16 85248444 85248449 SP1 TRANSFAC yes 12033627
chr16 85248445 85248455 SP1 JASPAR yes 12033628
Genes associated with rs149176550[chr16:85248446], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More