EnhancerDB
  1. Home
  2. SNP
  3. rs149177079[chr2:238573944]
Enhancers that have rs149177079[chr2:238573944]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238567229 238591955 enh19400
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149177079[chr2:238573944]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238573942 238573957 HNF1A JASPAR yes 82129237
chr2 238573943 238573955 HNF1B JASPAR yes 82129238
chr2 238573943 238573956 HNF1B JASPAR yes 82129239
chr2 238573944 238573951 NKX3-1 JASPAR yes 82129240
Genes associated with rs149177079[chr2:238573944], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More