EnhancerDB
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  3. rs149270539[chr16:89526828]
Enhancers that have rs149270539[chr16:89526828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149270539[chr16:89526828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89526813 89526832 PAX5 JASPAR yes 12347485
chr16 89526818 89526837 REST JASPAR yes 12347486
chr16 89526822 89526832 SP1 JASPAR yes 12347487
chr16 89526822 89526836 TLX1 JASPAR yes 12347488
Genes associated with rs149270539[chr16:89526828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More