EnhancerDB
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  3. rs149294202[chr1:19756468]
Enhancers that have rs149294202[chr1:19756468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149294202[chr1:19756468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19756451 19756471 PPARG JASPAR yes 27189059
chr1 19756456 19756471 PRDM1 JASPAR yes 27189061
chr1 19756461 19756482 ZNF263 JASPAR yes 27189062
chr1 19756465 19756471 LEF1 TRANSFAC yes 27189063
chr1 19756465 19756471 SOX10 JASPAR yes 27189064
chr1 19756465 19756480 FOXP1 JASPAR yes 27189065
chr1 19756466 19756475 SRY JASPAR yes 27189066
chr1 19756466 19756477 FOXP2 JASPAR yes 27189067
chr1 19756468 19756476 FOXO3 JASPAR yes 27189068
Genes associated with rs149294202[chr1:19756468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More