EnhancerDB
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  3. rs149394376[chr2:232559041]
Enhancers that have rs149394376[chr2:232559041]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149394376[chr2:232559041]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232559036 232559041 SP1 TRANSFAC yes 81737603
chr2 232559037 232559042 SP1 TRANSFAC yes 81737604
chr2 232559037 232559043 SP1 TRANSFAC yes 81737605
Genes associated with rs149394376[chr2:232559041], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More