EnhancerDB
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  3. rs149460304[chr1:171388227]
Enhancers that have rs149460304[chr1:171388227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs149460304[chr1:171388227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171387018 171389065 AR GTRD no Prostate (PC-3) 21349618
chr1 171388224 171388236 MEF2A JASPAR yes 33078174
chr1 171388224 171388236 MEF2B JASPAR yes 33078175
chr1 171388224 171388236 MEF2D JASPAR yes 33078176
chr1 171388225 171388235 MEF2A JASPAR yes 33078177
chr1 171388226 171388230 TEAD2 TRANSFAC yes 33078178
chr1 171388226 171388236 MNX1 JASPAR yes 33078179
chr1 171388226 171388236 POU6F1 JASPAR yes 33078180
chr1 171388227 171388235 LMX1A JASPAR yes 33078181
chr1 171388227 171388235 LMX1B JASPAR yes 33078182
chr1 171388227 171388235 NKX6-1 JASPAR yes 33078183
chr1 171388227 171388235 NKX6-2 JASPAR yes 33078184
chr1 171388227 171388235 VAX1 JASPAR yes 33078185
chr1 171388227 171388235 VAX2 JASPAR yes 33078186
chr1 171388227 171388235 VSX1 JASPAR yes 33078187
chr1 171388227 171388235 VSX2 JASPAR yes 33078188
Genes associated with rs149460304[chr1:171388227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More