EnhancerDB
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  3. rs149523725[chr5:172227475]
Enhancers that have rs149523725[chr5:172227475]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172226784 172227709 vista50176
VISTA
Transcript factors that have rs149523725[chr5:172227475]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172226947 172227615 STAT3 UCSC Txn Factor no Conserved 108537512
chr5 172227177 172227528 FOS UCSC Txn Factor no Conserved 108537513
chr5 172227293 172227562 CEBPB UCSC Txn Factor no Conserved 108537514
chr5 172227463 172227482 CTCF JASPAR yes 67828854
chr5 172227463 172227482 CTCF JASPAR yes 70763576
chr5 172227474 172227485 NFIL3 JASPAR yes 67828855
chr5 172227474 172227485 NFIL3 JASPAR yes 70763577
chr5 172227475 172227486 CEBPA JASPAR yes 67828856
chr5 172227475 172227486 CEBPA JASPAR yes 70763578
chr5 172227475 172227487 DBP JASPAR yes 67828857
chr5 172227475 172227487 HLF JASPAR yes 67828858
chr5 172227475 172227487 JDP2 JASPAR yes 67828859
chr5 172227475 172227487 TEF JASPAR yes 67828860
chr5 172227475 172227487 DBP JASPAR yes 70763579
chr5 172227475 172227487 HLF JASPAR yes 70763580
chr5 172227475 172227487 JDP2 JASPAR yes 70763581
chr5 172227475 172227487 TEF JASPAR yes 70763582
Genes associated with rs149523725[chr5:172227475], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More