EnhancerDB
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  3. rs149528354[chr6:30803900]
Enhancers that have rs149528354[chr6:30803900]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149528354[chr6:30803900]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30803882 30803901 REST JASPAR yes 101057188
chr6 30803896 30803901 SP1 TRANSFAC yes 101057192
chr6 30803896 30803905 HIC2 JASPAR yes 101057193
chr6 30803899 30803903 LFA1 TRANSFAC yes 101057194
chr6 30803900 30803910 ID4 JASPAR yes 101057195
chr6 30803900 30803910 TCF3 JASPAR yes 101057196
chr6 30803900 30803910 TCF4 JASPAR yes 101057197
Genes associated with rs149528354[chr6:30803900], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More