EnhancerDB
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  3. rs149530058[chr1:205266123]
Enhancers that have rs149530058[chr1:205266123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149530058[chr1:205266123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205265747 205266622 TCF7L2 GTRD no Colon (HCT116) 21371695
chr1 205265772 205267510 TCF7L2 GTRD no Colon (HCT116) 21371696
chr1 205265825 205266831 TEF1 GTRD no Bone (Osteoblast) 21371697
chr1 205265862 205266731 TCF7L2 GTRD no Colon (HCT116) 21371698
chr1 205265890 205266618 TCF7L2 GTRD no Colon (HCT116) 21371699
chr1 205265925 205268073 ZNF274 GTRD no Cervix (HeLa-S3) 21371700
chr1 205265925 205268073 ZNF274 GTRD no Cervix (HeLa-S3) 107861710
chr1 205265928 205266725 TCF7L2 GTRD no Colon (HCT116) 21371701
chr1 205266061 205266325 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371702
chr1 205266079 205266646 ZNF274 GTRD no Cervix (HeLa-S3) 21371703
chr1 205266108 205266123 FOXA1 JASPAR yes 34752938
chr1 205266109 205266124 FOXP1 JASPAR yes 34752939
chr1 205266110 205266124 FOXF2 JASPAR yes 34752942
chr1 205266112 205266123 FOXA1 JASPAR yes 34752946
chr1 205266120 205266676 TCF7L2 GTRD no Colon (HCT116) 21371704
chr1 205266121 205266132 NFE2L2 JASPAR yes 34752948
Genes associated with rs149530058[chr1:205266123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More