EnhancerDB
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  3. rs149539575[chr1:154381021]
Enhancers that have rs149539575[chr1:154381021]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 154380711 154381076 vista3372
VISTA
Transcript factors that have rs149539575[chr1:154381021]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154380781 154381151 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21340380
chr1 154380781 154381151 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832536
chr1 154380858 154381134 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21340381
chr1 154380858 154381134 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832537
chr1 154380955 154381255 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21340382
chr1 154380955 154381255 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107832538
chr1 154380960 154381296 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21340383
chr1 154380960 154381296 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107832539
chr1 154380983 154381243 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21340384
chr1 154380983 154381243 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107832540
chr1 154381009 154381022 ELF1 JASPAR yes 32289113
chr1 154381009 154381022 ELF1 JASPAR yes 118372609
chr1 154381012 154381022 ETV6 JASPAR yes 32289115
chr1 154381012 154381022 ETV6 JASPAR yes 118372611
chr1 154381013 154381021 EHF JASPAR yes 32289116
chr1 154381013 154381021 EHF JASPAR yes 118372612
chr1 154381014 154381021 SPI1 JASPAR yes 32289117
chr1 154381014 154381021 SPI1 JASPAR yes 118372613
chr1 154381015 154381228 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21340385
chr1 154381015 154381228 FOXA1 UCSC Txn Factor no Conserved 107832541
chr1 154381015 154381228 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107832542
chr1 154381020 154381027 SPIB JASPAR yes 32289118
chr1 154381020 154381027 SPIB JASPAR yes 118372614
Genes associated with rs149539575[chr1:154381021], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More