EnhancerDB
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  3. rs149555558[chr2:75069242]
Enhancers that have rs149555558[chr2:75069242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 75065325 75080614 enh5655
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149555558[chr2:75069242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 75069231 75069246 SOX21 JASPAR yes 75108338
chr2 75069236 75069246 ALX3 JASPAR yes 75108339
chr2 75069236 75069246 GSX2 JASPAR yes 75108340
chr2 75069236 75069246 MIXL1 JASPAR yes 75108341
chr2 75069237 75069245 ISX JASPAR yes 75108342
chr2 75069237 75069245 LHX9 JASPAR yes 75108343
chr2 75069237 75069245 LMX1B JASPAR yes 75108344
chr2 75069237 75069245 PRRX1 JASPAR yes 75108345
chr2 75069237 75069245 RAX2 JASPAR yes 75108346
chr2 75069237 75069245 SHOX JASPAR yes 75108347
chr2 75069237 75069245 UNCX JASPAR yes 75108348
Genes associated with rs149555558[chr2:75069242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More