EnhancerDB
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  3. rs149562689[chr1:234849676]
Enhancers that have rs149562689[chr1:234849676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149562689[chr1:234849676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234846140 234850353 ZNF274 GTRD no Bone Marrow (K562) 21396143
chr1 234848192 234850267 ZNF274 GTRD no Blood (GM12878) 21396152
chr1 234848631 234850208 ZNF274 GTRD no Bone Marrow (K562) 21396155
chr1 234848654 234850176 ZNF274 GTRD no Bone Marrow (K562) 21396156
chr1 234848669 234850115 ZNF274 GTRD no Bone Marrow (K562) 21396157
chr1 234848716 234849930 ZNF274 GTRD no Bone Marrow (K562) 21396159
chr1 234848746 234850269 ZNF274 GTRD no Bone Marrow (K562) 21396161
chr1 234848845 234850236 ZNF274 GTRD no Blood (GM12878) 21396168
chr1 234848857 234849732 ZNF274 GTRD no Bone Marrow (K562) 21396170
chr1 234848871 234850315 ZNF274 GTRD no Blood (GM12878) 21396171
chr1 234848942 234849708 ZNF274 GTRD no Bone Marrow (K562) 21396183
chr1 234849027 234850354 ZNF274 GTRD no Blood (GM12878) 21396187
chr1 234849102 234849686 ZNF143 GTRD no Epithelial (MCF-7) 21396189
chr1 234849304 234849846 ZBTB33 GTRD no Brain (SK-N-SH) 21396194
chr1 234849305 234850003 ZBTB33 GTRD no Brain (SK-N-SH) 21396195
chr1 234849317 234849763 ZBTB33 GTRD no Brain (SK-N-SH) 21396196
chr1 234849432 234850283 ZNF274 GTRD no Cervix (HeLa-S3) 21396197
Genes associated with rs149562689[chr1:234849676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 235272651 235292251 - TOMM20 ENSG00000173726.6 235292251 422975 Thyroid 0.199493 1965