EnhancerDB
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  3. rs149626023[chr1:39662916]
Enhancers that have rs149626023[chr1:39662916]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 39662647 39663006 vista1266
VISTA
Transcript factors that have rs149626023[chr1:39662916]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39662902 39662917 FOXA1 JASPAR yes 28266127
chr1 39662902 39662917 FOXA1 JASPAR yes 118275653
chr1 39662904 39662916 FOXI1 JASPAR yes 28266132
chr1 39662904 39662916 FOXI1 JASPAR yes 118275658
chr1 39662910 39662921 FOXB1 JASPAR yes 28266136
chr1 39662910 39662921 FOXB1 JASPAR yes 118275662
Genes associated with rs149626023[chr1:39662916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More