EnhancerDB
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  3. rs149628670[chr1:16206502]
Enhancers that have rs149628670[chr1:16206502]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16203705 16215635 enh81
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149628670[chr1:16206502]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16204564 16209335 TCF7L2 GTRD no Colon (HCT116) 21325255
chr1 16204564 16209335 TCF7L2 GTRD no Colon (HCT116) 107802203
chr1 16206499 16206513 POU1F1 JASPAR yes 27009799
chr1 16206500 16206512 POU3F1 JASPAR yes 27009800
chr1 16206500 16206513 POU3F3 JASPAR yes 27009801
Genes associated with rs149628670[chr1:16206502], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More