EnhancerDB
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  3. rs149817342[chr15:42232721]
Enhancers that have rs149817342[chr15:42232721]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr15 42232566 42232958 vista19770
VISTA
Transcript factors that have rs149817342[chr15:42232721]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42232678 42233274 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21651354
chr15 42232678 42233274 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108135315
chr15 42232681 42233185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651355
chr15 42232681 42233185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108135316
chr15 42232716 42232721 MYC TRANSFAC yes 23007975
chr15 42232716 42232721 MYC TRANSFAC yes 70514261
Genes associated with rs149817342[chr15:42232721], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More