EnhancerDB
  1. Home
  2. SNP
  3. rs149832552[chr2:102333144]
Enhancers that have rs149832552[chr2:102333144]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149832552[chr2:102333144]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102333131 102333145 RORA JASPAR yes 75830113
chr2 102333134 102333144 RORA JASPAR yes 75830114
chr2 102333142 102333150 HOXA5 JASPAR yes 75830116
Genes associated with rs149832552[chr2:102333144], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More