EnhancerDB
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  3. rs149873556[chr1:117413085]
Enhancers that have rs149873556[chr1:117413085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs149873556[chr1:117413085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117412512 117414237 ZNF274 GTRD no Bone Marrow (K562) 21334006
chr1 117412553 117413343 ZNF143 GTRD no Epithelial (MCF-7) 21334007
chr1 117412607 117414257 ZNF274 GTRD no Bone Marrow (K562) 21334008
chr1 117412633 117413515 ZNF143 GTRD no Epithelial (MCF-7) 21334009
chr1 117412639 117413406 ZNF143 GTRD no Epithelial (MCF-7) 21334010
chr1 117412667 117413569 ZNF143 GTRD no Epithelial (MCF-7) 21334011
chr1 117413038 117414023 ZNF274 GTRD no Bone Marrow (K562) 21334012
chr1 117413044 117413521 ZNF274 GTRD no Bone Marrow (K562) 21334013
chr1 117413080 117413088 NR4A2 JASPAR yes 31846597
chr1 117413084 117413095 HOXC13 JASPAR yes 31846598
Genes associated with rs149873556[chr1:117413085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More