EnhancerDB
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  3. rs149906640[chr1:39618361]
Enhancers that have rs149906640[chr1:39618361]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149906640[chr1:39618361]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39618340 39618361 IRF1 JASPAR yes 28259227
chr1 39618350 39618365 MEF2C JASPAR yes 28259230
chr1 39618351 39618366 MEF2A JASPAR yes 28259231
chr1 39618352 39618364 MEF2A JASPAR yes 28259232
chr1 39618352 39618364 MEF2B JASPAR yes 28259233
chr1 39618352 39618364 MEF2D JASPAR yes 28259234
chr1 39618353 39618363 MEF2A JASPAR yes 28259235
Genes associated with rs149906640[chr1:39618361], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More