EnhancerDB
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  3. rs149949417[chr15:55515025]
Enhancers that have rs149949417[chr15:55515025]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55507525 55515978 enh3597
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Heart
chr15 55514866 55515077 vista20044
VISTA
Transcript factors that have rs149949417[chr15:55515025]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55513992 55515571 ZNF143 GTRD no Epithelial (MCF-7) 108139748
chr15 55513992 55515571 ZNF143 GTRD no Epithelial (MCF-7) 108139749
chr15 55514701 55515297 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21654568
chr15 55514701 55515297 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108139751
chr15 55514781 55515136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21654569
chr15 55514781 55515136 RUNX3 UCSC Txn Factor no Conserved 108139752
chr15 55514781 55515136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108139753
chr15 55514838 55515268 ZNF143 GTRD no Epithelial (MCF-7) 108139754
chr15 55514901 55515177 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21654570
chr15 55514901 55515177 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108139755
chr15 55514911 55515064 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21654571
chr15 55514911 55515064 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108139756
chr15 55514917 55515207 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21654572
chr15 55514917 55515207 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108139757
chr15 55514982 55515079 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21654573
chr15 55514982 55515079 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108139758
chr15 55515023 55515044 IRF1 JASPAR yes 23494458
chr15 55515023 55515044 IRF1 JASPAR yes 70527595
chr15 55515025 55515030 ETS2 TRANSFAC yes 23494459
chr15 55515025 55515030 ETS2 TRANSFAC yes 70527596
Genes associated with rs149949417[chr15:55515025], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More