EnhancerDB
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  3. rs149965576[chr17:42190386]
Enhancers that have rs149965576[chr17:42190386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149965576[chr17:42190386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42190381 42190391 SREBF1 JASPAR yes 54388849
chr17 42190381 42190391 SREBF2 JASPAR yes 54388850
chr17 42190384 42190401 RXRA JASPAR yes 54388851
Genes associated with rs149965576[chr17:42190386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More